Supervisor: Giacomo Cappon
Creation Date: 03/08/2025 15:55
Digital twins for type 1 diabetes (T1D) aim to replicate the physiological responses of individual patients using mathematical models, enabling personalized and adaptive treatment. A critical step in this approach is the twinning procedure, i.e., the estimation of patient-specific parameters that allow the model to accurately mimic glucose-insulin dynamics under varying conditions such as meals, insulin injections, and physical activity.
This thesis investigates and compares multiple advanced inference methodologies for improving the twinning procedure within a state-of-the-art digital twin framework tailored for T1D patients. The focus will be on evaluating the effectiveness, robustness, and computational efficiency of the following approaches:
Maximum a Posteriori (MAP) estimation, which offers a fast and deterministic approach to parameter identification by optimizing the posterior distribution.
Markov Chain Monte Carlo (MCMC) methods, which provide asymptotically exact samples from the posterior and allow full uncertainty quantification, albeit at higher computational cost.
Simulation-Based Inference (SBI) techniques, including likelihood-free methods that leverage forward simulations and machine learning to approximate the posterior, offering scalability and flexibility.
Liquid Time-Constant Neural Networks (LTC-NN), a recent class of models that use deep learning to capture time-dependent latent dynamics, potentially enabling more expressive and data-driven representations of patient physiology.
The thesis will involve the development and implementation of these methods in a unified experimental pipeline. Performance will be assessed using synthetic data generated from the virtual patient models as well as real-world clinical data where available. Evaluation metrics will include predictive accuracy, convergence diagnostics, uncertainty calibration, and computational efficiency.
Dataset type: Already acquired data
Dataset description: The student will be provided with both simulated and real-world data of people with type 1 diabetes (N = 100 + 100) consisting of: - Glucose data collected every 5 minutes using Continuous Glucose Monitoring (CGM) sensors - Insulin data (bolus injections and basal rate) - Meal data (carbohydrate intake) - Physical activity data
List of Methods: MAP, MCMC, SBI, LTC-NN
STATISTICAL METHODS FOR BIOENGINEERING MACHINE LEARNING AND DATA SCIENCE FOR BIOENGINEERING MODELING METHODOLOGY FOR PHYSIOLOGY AND MEDICINE Important: Completing these courses is preferable but not mandatory.